Publication List
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Sawa Iwasaki‑Yokozawa, Ryota Nanjo, Yasuko Akiyama‑Oda, Hiroki Oda
Lineage‑specific, fast‑evolving GATA‑like gene regulates zygotic gene activation to promote endoderm specification and pattern formation in the Theridiidae spider
BMC Biology 20: 233
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Motohiro Fujiwara, Yasuko Akiyama-Oda, and Hiroki Oda
Virtual spherical-shaped multicellular platform for simulating the morphogenetic processes of spider-like body axis formation
Frontiers in Cell and Developmental Biology 10:932814. doi: 10.3389/fcell.2022.932814
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Yasuko Akiyama-Oda, Takanori Akaiwa, Hiroki Oda
Reconstruction of the Global Polarity of an Early Spider Embryo by Single-Cell and Single-Nucleus Transcriptome Analysis
Front. Cell Dev. Biol. 10:933220. doi: 10.3389/fcell.2022.933220
(Open Acess: BB CY 4.0)
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Shigetaka Nishiguchi and Hiroki Oda
Structural variability and dynamics in the ectodomain of an ancestral-type classical cadherin revealed by AFM imaging
J Cell Sci (2021) , Volume134, Issue 14 (Open Acess: CC BY 4.0)
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Yasuko Akiyama-Oda and Hiroki Oda
Hedgehog signaling controls segmentation dynamics and diversity via msx1 in a spider embryo
Science Advances 6, eaba7261 (2020)
OA(CC BY 4.0)
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Hiroki Oda and Yasuko Akiyama-Oda
The common house spider Parasteatoda tepidariorum
EvoDevo (2020) 11:6
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Hiroki Oda, Sawa Iwasaki-Yokozawa, Toshiya Usui and
Yasuko Akiyama-Oda
Experimental duplication of bilaterian body axes in spider embryos: Holm’s organizer and self-regulation of embryonic fields
Development Genes and Evolution
10 April 2019, First Online (Open Access)
DOI: 10.1007/s00427-019-00631-x
https://link.springer.com/article/10.1007/s00427-019-00631-x
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Sawa Iwasaki-Yokozawa, Yasuko Akiyama-Oda, Hiroki Oda
Genome-scale embryonic developmental profile of gene expression in the common house spider Parasteatoda tepidariorum
Data in Brief 19 (2018): 865-867
https://www.sciencedirect.com/science/article/pii/S2352340918306127
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Natsuki Hemmi, Yasuko Akiyama-Oda, Koichi Fujimoto, and Hiroki Oda(2018)
A quantitative study of the diversity of stripe-forming processes in an arthropod cell-based field
Developmental Biology, 437(2):84-104
DOI: 10.1016/j.ydbio.2018.03.001
https://www.sciencedirect.com/science/article/pii/S0012160617309089
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Hiroki Oda
How to make stripes in a field of cells: A spider species for research
Science Trends, May 31, 2018
https://sciencetrends.com/how-to-make-stripes-in-a-field-of-cells-a-spider-species-for-research/
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Schwager, Sharma, Clarke, Leite, Wierschin, Pechmann, Akiyama-Oda, Esposito, Bechsgaard, Bilde, Buffry, Chao, Dinh, Doddapaneni, Dugan, Eibner, Extavour, Funch, Garb, Gonzalez, Gonzalez, Griffiths-Jones, Han, Hayashi, Hilbrant, Hughes, Janssen, Lee, Maeso, Murali, Muzny, da Fonseca, Paese, Qu, Ronshaugen, Schomburg, Schonauer, Stollewerk, Torres-Oliva, Turetzek, Vanthournout, Werren, Wolff, Worley, Bucher, Gibbs, Coddington, Oda, Stanke, Ayoub, Prpic, Flot, Posnien, Richards and McGregor(2017)
The house spider genome reveals an ancient whole-genome duplication during arachnid evolution
BMC Biology, Volume 15, Issue 62, 2017
https://bmcbiol.biomedcentral.com/articles/10.1186/s12915-017-0399-x
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Mizuki Sasaki, Yasuko Akiyama-Oda, and Hiroki Oda(2017)
Evolutionary origin of type IV classical cadherins in arthropods
BMC Evolutionary Biology, Volume 17, Issue 142, June
DOI: 10.1186/s12862-017-0991-2
https://bmcevolbiol.biomedcentral.com/articles/10.1186/s12862-017-0991-2
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Shigetaka Nishiguchi, Akira Yagi, Nobuaki Sakai, Hiroki Oda(2016)
Divergence of structural strategies for homophilic E-cadherin binding among bilaterians
Journal of Cell Science 2016 129: 3309-3319;
doi: 10.1242/jcs.189258
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Yasuko Akiyama-Oda and Hiroki Oda(2016)
Multi-color FISH facilitates analysis of cell-type diversification and developmental gene regulation in the Parasteatoda spider embryo
Development, Growth and Differentiation 58, 215-224
http://onlinelibrary.wiley.com/doi/10.1111/dgd.12263/abstract
Oda, H. (2012)
Evolution of the Cadherin-Catenin Complex.
In “Adherens Junctions: from Molecular Mechanisms to Tissue Development and Disease” edited by Harris, T. Subcellular Biochemistry 60, pp.9-35, Springer Netherlands.
http://link.springer.com/chapter/10.1007%2F978-94-007-4186-7_2
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Masaki Kanayama, Yasuko Akiyama-Oda, Osamu Nishimura, Hiroshi Tarui, Kiyokazu Agata and Hiroki Oda (2011)
Travelling and splitting of a wave of hedgehog expression involved in spider-head segmentation
Nature Communications 2, 500.
http://www.nature.com/ncomms/journal/v2/n10/full/ncomms1510.html
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Oda, H. and Takeichi, M. (2011)
Evolution Structural and functional diversity of cadherin at the adherens junction
Journal of Cell Biology 193, 1137-1146.
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Masaki Kanayama, Yasuko Akiyama-Oda, Hiroki Oda (2010)
Early embryonic development in the spider Achaearanea tepidariorum : Microinjection verifies that cellularization is complete before the blastoderm stage
Arthropod Structure and Development 39, 436-445.
Tomohiro Haruta, Rahul Warrior, Shigenobu Yonemura and Hiroki Oda (2010)
The proximal half of the Drosophila E-cadherin extracellular region is dispensable for many cadherin-dependent events but required for ventral furrow formation.
Genes to Cells 15, 193-208.
https://onlinelibrary.wiley.com/doi/full/10.1111/j.1365-2443.2010.01389.x
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Yasuko Akiyama-Oda and Hiroki Oda (2010)
Cell migration that orients the dorsoventral axis is coordinated with anteroposterior patterning mediated by Hedgehog signaling in the early spider embryo.
Development 137, 1263-1273
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Oda, H., and Akiyama-Oda, Y. (2008)
Differing strategies for forming the arthropod body plan: Lessons from Dpp, Sog and Delta in the fly Drosophila and spider Achaearanea
Development, Growth and Differentiation 50, 203-214.
https://onlinelibrary.wiley.com/doi/full/10.1111/j.1440-169X.2008.00998.x
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Oda, H., Nishimura, O., Hirao, Y., Tarui, H., Agata, K. and Akiyama-Oda, Y.(2007)
Progressive activation of Delta-Notch signaling from around the blastopore is required to set up a functional caudal lobe in the spider Achaearanea tepidariorum
Development 134, 2195-2205.
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Akiyama-Oda, Y. and Oda, H. (2006)
Axis specification in the spider embryo: dpp is required for radial-to-bilateral symmetry transformation and sog for ventral patterning
Development 133, 2347-2357.
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Oda, H., Tagawa, K. and Akiyama-Oda, Y. (2005)
Diversification of epithelial adherens junctions with independent reductive changes in cadherin form: identification of potential molecular synapomorphies among bilaterians
Evolution & Development 7, 377-390.
Yamazaki, K., Akiyama-Oda, Y. and Oda, H. (2005)
Expression patterns of a twist-related gene in embryos of the spider Achaearanea tepidariorum reveal divergent aspects of mesoderm development in the fly and spider
Zoological Science 22, 177-185.
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Oda, H., Akiyama-Oda, Y. and Zhang, S. (2004)
Two classic cadherin-related molecules with no cadherin extracellular repeats in the cephalochordate amphioxus: distinct adhesive specificities and possible involvement in the development of multicell-layered structures
Journal of Cell Science 117, 2757-2767.
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Akiyama-Oda, Y. and Oda, H. (2003)
Early patterning of the spider embryo: A cluster of mesenchymal cells at the cumulus produces Dpp signals received by germ disc epithelial cells
Development 130, 1735-1747.
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Oda, H., Wada, H., Tagawa, K., Akiyma-Oda, Y., Satoh, N., Humphreys, T., Zhang, S., and Tsukita, S. (2002)
A novel amphioxus cadherin that localizes to epithelial adherens junctions has an unusual domain organization with implications for chordate phylogeny
Evolution & Development 4, 426-434.
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Oda, H. and Tsukita, S. (2001)
Real-time imaging of cell-cell adherens junction reveals that Drosophila mesoderm invagination begins with two phases of apical constriction of cells
J. Cell Sci. 114, 493-501.
Akiyama-Oda, Y., Hotta, Y., Tsukita, S., and Oda, H. (2000)
Mechanism of glia-neuron cell fate switch in the Drosophila thoracic neuroblast 6-4 lineage.
Development 127, 3513-3522.
Akiyama-Oda, Y., Hotta, Y., Tsukita, S., and Oda, H. (2000)
Distinct mechanisms triggering glial differentiation in Drosophila thoracic and abdominal neuroblasts 6-4.
Dev. Biol. 222, 429-439.
Oda, H., and Tsukita, S. (1999)
Nonchordate classic cadherins have a structurally and functionally unique domain that is absent from chordate classic cadherins.
Dev. Biol. 216, 406-422.
Verkhusha, V. V., Tsukita, S., and Oda, H. (1999)
Actin dynamics in lamellipodia of migrating border cells in the Drosophila ovary revealed by a GFP-actin fusion protein.
FEBS letters 445, 395-401.
Oda, H., and Tsukita, S. (1999)
Dynamic features of adherens junctions during Drosophila embryonic epithelial morphogenesis revealed by a α-catenin-GFP fusion protein.
Dev. Genes Evol. 209, 218-225.
Yasuko Akiyama-Oda, Toshihiko Hosoya and Yoshiki Hotta. (1999)
Asymmetric cell division of thoracic neuroblast 6-4 to bifurcate glial and neuronal lineage in Drosophila.
Development 126, 1967-1974.
Oda, H., Tsukita, S., and Takeichi, M. (1998)
Dynamic behavior of the cadherin-based cell-cell adhesion system during Drosophila gastrulation.
Dev. Biol. 203, 435-450.
Yasuko Akiyama-Oda, Toshihiko Hosoya and Yoshiki Hotta. (1998)
Alteration of cell fate by ectopic expression of Drosophila glial cells missing in non-neural cells.
Dev. Genes Evol. 208, 578-585.
Oda, H., Uemura, T., and Takeichi, M. (1997)
Phenotypic analysis of null mutants for DE-cadherin and Armadillo in Drosophila ovaries reveals distinct aspects of their functions in cell adhesion and cytoskeletal organization
Genes to Cells 2, 29-40.
Uemura, T., Oda, H., Kraut, R., Hayashi, S., Kataoka, Y., and Takeichi, M.(1996)
Zygotic Drosophila E-cadherin expression is required for processes of dynamic epithelial cell rearrangement in the Drosophila embryo.
Genes & Development 10, 659-671.
Yasuko Akiyama, Toshihiko Hosoya, Anthony M. Poole and Yoshiki Hotta. (1996)
The gcm-motif: a novel DNA binding motif conserved in Drosophila and mammals.
Proc. Natl. Acad. Sci. USA 93, 14912-14916.
Oda, H., Uemura, T., Harada, Y., Iwai, Y., and Takeichi, M. (1994)
A Drosophila homolog of cadherin associated with Armadillo and essential for embryonic cell-cell adhesion.
Developmental Biology 165, 716-726.
Oda, H., Uemura, T., Shiomi, K., Nagafuchi, A., Tsukita, S., and Takeichi, M.(1993)
Identification of a Drosophila homologue of a-catenin and its association with the armadillo protein.
Journal of Cell Biology 121, 1133-1140.